CDS

Accession Number TCMCG007C00404
gbkey CDS
Protein Id XP_009119306.3
Location complement(join(1528732..1529217,1529816..1530525,1530764..1530988,1531067..1531379))
Gene LOC103844260
GeneID 103844260
Organism Brassica rapa

Protein

Length 577aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009121058.3
Definition cryptochrome-1 isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category LT
Description FAD binding domain of DNA photolyase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12119        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000166        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0002252        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006732        [VIEW IN EMBL-EBI]
GO:0006753        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006873        [VIEW IN EMBL-EBI]
GO:0006874        [VIEW IN EMBL-EBI]
GO:0006875        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007623        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009117        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009414        [VIEW IN EMBL-EBI]
GO:0009415        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009615        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009645        [VIEW IN EMBL-EBI]
GO:0009646        [VIEW IN EMBL-EBI]
GO:0009648        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009785        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009882        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009909        [VIEW IN EMBL-EBI]
GO:0009911        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010073        [VIEW IN EMBL-EBI]
GO:0010075        [VIEW IN EMBL-EBI]
GO:0010118        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010244        [VIEW IN EMBL-EBI]
GO:0010617        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019725        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030003        [VIEW IN EMBL-EBI]
GO:0030522        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0040008        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042726        [VIEW IN EMBL-EBI]
GO:0042752        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048037        [VIEW IN EMBL-EBI]
GO:0048507        [VIEW IN EMBL-EBI]
GO:0048509        [VIEW IN EMBL-EBI]
GO:0048511        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048571        [VIEW IN EMBL-EBI]
GO:0048573        [VIEW IN EMBL-EBI]
GO:0048574        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048582        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048638        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0050660        [VIEW IN EMBL-EBI]
GO:0050662        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050801        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051094        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051480        [VIEW IN EMBL-EBI]
GO:0051607        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055065        [VIEW IN EMBL-EBI]
GO:0055074        [VIEW IN EMBL-EBI]
GO:0055080        [VIEW IN EMBL-EBI]
GO:0055082        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071949        [VIEW IN EMBL-EBI]
GO:0072387        [VIEW IN EMBL-EBI]
GO:0072503        [VIEW IN EMBL-EBI]
GO:0072507        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0098771        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:1900618        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901371        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1902347        [VIEW IN EMBL-EBI]
GO:1905421        [VIEW IN EMBL-EBI]
GO:2000024        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000028        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000243        [VIEW IN EMBL-EBI]
GO:2000377        [VIEW IN EMBL-EBI]
GO:2000379        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGACGAACAGAAAGACTATAGTGTGGTTCAGAAGAGACCTAAGAATCGAGGATAACCCCGCACTAGCAGCAGCTGCTCGCGAAGGATCAGTCTTCCCTGTTTTCATTTGGTGCCCTGAAGAAGAAGGTCAGTTTCATCCAGGAAGGGCTTCAAGATGGTGGATGAAACAGTCTCTCGCTCACTTGAACCAATCCTTGAAGTCTCTTGGCTCCCACCTCACGTTTATCAAAACACATAGCACGGTTTCCGCTATCTTGGACTGTGTCCGCGCCACTGGTGCCACAAAAGTCGTCTTCAACCACCTCTATGATCCTGTTTCGCTAGTTAGAGACCATAACGTAAAGGAGAAACTTATGGAACGTGGGATCTCTATGCAAGGCTACAACGGTGATCTATTGTATGAGCCTTGGGAGATAAACTCAGAAAATGGCAAACCTTTCACGAGTTTTTCTCCTTACTGGAAGAAATGCTTAGACATGTCGGTTGAATCCGTTATGCTTCCTCCTCCTTGGCGTTTGATACCTCTAACTGCAGCTGAAGGGGTGTGGGCATGTTCAATAGAAGAACTAGGGCTAGAAGACGAGGCAGAGAAGCCAAGCAACGCGCTGTTAACTAGAGCTTGGTCACCAGGCTGGAGCAACGCTGATAAGACACTAACCGAGTTCATCGAGAAACAGTTGATAGACTACGCAAAGAACAGCAAGAAAGTAGTTGGGAACTCAACCTCGATGCTCTCTCCCTATCTCCATTTCGGAGAAATAAGCGTCAGACGTGTGTTCCAGTGTGTCCGTATGAAAAAAATCATATGGGCAAGAGACAAAAACACTGAAGGAGAAGAGAGCGCTGATCTTTTCCTTAGAGGGATTGGTCAAAGAGAGTATTCTCGGTATATATGTTTCAACTTCCCTTTTACTCACGAGCAGTCCTTGTTGAGTCATCTTCGTTTCTTCCCTTGGGACGCTGATGTTGGCAAGTTCAAGGCGTGGAGTCAAGGCAGGACTGGGTATCCGTTGGTGGATGCTGGAATGAGGGAGCTTTGGGCTACTGGATGGATGCATAACAGGATAAGAGTGATAGTTTCGAGCTTTGCTGTGAAGTTTCTCCTTCTTCCGTGGAAATGGGGAATGAAGTATTTTTGGGATACTCTTTTGGATGCTGATTTGGAGTGTGACATCATTGGCTGGCAGTATATCTCCGGGAGCTTACCTGATGGCCACGAGCTTGATCGCTTGGACAATCCTGCGATACAAGGTGCAAAATATGATCCAGAAGGCGAGTACATAAGGCAATGGCTTCCCGAGCTGGCGAGAATGCCAACGGAATGGATCCATCATCCATGGGACGCTCCTTCAACTGTACTCAAAGCTTCTGGAGTGGAGCTCGGTGCAAACTACGCGAAACCCATCGTAGATATCGACACAGCTCGTGAGCTGCTAACCAAAGCCATATCAAGAACTCGCGAGGCACAGATCATGATCGGAGCAGCGCCTGATGAGATTGTAGCTGATAGCTACGAGGCCTTAGAGGGTAATCATACCGTTAAAGTACCAGGTCTTCTTTGCCCCTCTGCGTCTTCTAATGACCAGCGAGTACCTTCGGCTGTTCGTTACAATGGGTTAAAGAGAGTGAAACCTGCAGAAGAAGAAGAAGAAGAAGAGAGGGAGATGAAGAGATGTAGAGAAGAAAGAGACTTGTTTTCCACAGCTGAGTCTTCTTCTTCTGATGGTTAG
Protein:  
MATNRKTIVWFRRDLRIEDNPALAAAAREGSVFPVFIWCPEEEGQFHPGRASRWWMKQSLAHLNQSLKSLGSHLTFIKTHSTVSAILDCVRATGATKVVFNHLYDPVSLVRDHNVKEKLMERGISMQGYNGDLLYEPWEINSENGKPFTSFSPYWKKCLDMSVESVMLPPPWRLIPLTAAEGVWACSIEELGLEDEAEKPSNALLTRAWSPGWSNADKTLTEFIEKQLIDYAKNSKKVVGNSTSMLSPYLHFGEISVRRVFQCVRMKKIIWARDKNTEGEESADLFLRGIGQREYSRYICFNFPFTHEQSLLSHLRFFPWDADVGKFKAWSQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDIIGWQYISGSLPDGHELDRLDNPAIQGAKYDPEGEYIRQWLPELARMPTEWIHHPWDAPSTVLKASGVELGANYAKPIVDIDTARELLTKAISRTREAQIMIGAAPDEIVADSYEALEGNHTVKVPGLLCPSASSNDQRVPSAVRYNGLKRVKPAEEEEEEEREMKRCREERDLFSTAESSSSDG